PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S03734.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family G2-like
Protein Properties Length: 380aa    MW: 41515.2 Da    PI: 8.8083
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S03734.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.57.1e-3449103155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Jcr4S03734.10  49 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103
                    79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.48546106IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.0E-3248104IPR009057Homeodomain-like
SuperFamilySSF466891.06E-1748103IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-2549104IPR006447Myb domain, plants
PfamPF002491.7E-951102IPR001005SANT/Myb domain
PfamPF143792.1E-10135171IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MYRPKSVPSS SLVHKSPPVH GQHLDCGAIA MDPINGGNSL NNNPSLASKQ RLRWTHELHE  60
RFVDAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDGKKADKK  120
ETGDMLSNLD GSSGMQITEA LKLQMEVQRQ LQLRIEAQGK YLKKIIEEQQ RLSGVLVEVP  180
GAGASGPISG DSCPESDKTD PATPAPTSES PIQEKAAKER APDKSLSIDE SFSSHHEPLT  240
PDSRCNVGSP AESPKGERSM KKQRVCMATA YAKPEMVLTH QILESSLNSY PQSHSVFLTR  300
EPFDPSSGLS MGNDDQIEKV LEVHPKGRCH GKQIIARTLY DLGKFAGCLP LSSAEQAYCT  360
SQEALKMLKN LLKSRTMKAQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3837171e-132FQ383717.1 Vitis vinifera clone SS0ABG19YO09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012082209.10.0PREDICTED: myb family transcription factor APL isoform X1
TrEMBLA0A067KB230.0A0A067KB23_JATCU; Uncharacterized protein
STRINGVIT_00s0475g00040.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86103343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-119G2-like family protein